Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igh-VJ558P01758 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igh-VJ558P01758 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igh-VJ558P01758 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Thap2-203ENSMUST00000218989 527 ntBASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Gm10154-201ENSMUST00000084445 354 ntBASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.83□□□□□ -0.36
Igh-VJ558P01758 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Gm9726-201ENSMUST00000180321 678 ntBASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igh-VJ558P01758 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms