Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vti1aO89116 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.01■□□□□ 0.15
Vti1aO89116 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.01■□□□□ 0.15
Vti1aO89116 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.01■□□□□ 0.15
Vti1aO89116 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.01■□□□□ 0.15
Vti1aO89116 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.01■□□□□ 0.15
Vti1aO89116 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vti1aO89116 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vti1aO89116 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vti1aO89116 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Vti1aO89116 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vti1aO89116 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Vti1aO89116 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Vti1aO89116 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vti1aO89116 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16■□□□□ 0.15
Vti1aO89116 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16■□□□□ 0.15
Vti1aO89116 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Vti1aO89116 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Mir7023-201ENSMUST00000185093 64 ntBASIC16■□□□□ 0.15
Vti1aO89116 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16■□□□□ 0.15
Vti1aO89116 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vti1aO89116 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Vti1aO89116 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16■□□□□ 0.15
Vti1aO89116 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16■□□□□ 0.15
Vti1aO89116 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Vti1aO89116 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.99■□□□□ 0.15
Vti1aO89116 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.99■□□□□ 0.15
Vti1aO89116 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Gm10253-201ENSMUST00000194270 940 ntBASIC15.99■□□□□ 0.15
Vti1aO89116 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.99■□□□□ 0.15
Vti1aO89116 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.99■□□□□ 0.15
Vti1aO89116 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Vti1aO89116 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.99■□□□□ 0.15
Vti1aO89116 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vti1aO89116 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vti1aO89116 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vti1aO89116 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vti1aO89116 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.98■□□□□ 0.15
Vti1aO89116 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.98■□□□□ 0.15
Vti1aO89116 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms