Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.24□□□□□ -0.13
Hcn3O88705 Gm18669-201ENSMUST00000216049 778 ntBASIC14.24□□□□□ -0.13
Hcn3O88705 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.24□□□□□ -0.13
Hcn3O88705 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Hcn3O88705 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.24□□□□□ -0.13
Hcn3O88705 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hcn3O88705 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Hcn3O88705 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hcn3O88705 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hcn3O88705 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Hcn3O88705 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hcn3O88705 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hcn3O88705 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.23□□□□□ -0.13
Hcn3O88705 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.23□□□□□ -0.13
Hcn3O88705 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.23□□□□□ -0.13
Hcn3O88705 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.23□□□□□ -0.13
Hcn3O88705 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.23□□□□□ -0.13
Hcn3O88705 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.23□□□□□ -0.13
Hcn3O88705 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.23□□□□□ -0.13
Hcn3O88705 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn3O88705 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hcn3O88705 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Hcn3O88705 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hcn3O88705 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hcn3O88705 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Celf4-206ENSMUST00000224553 1729 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hcn3O88705 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Hcn3O88705 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm8825-201ENSMUST00000182565 998 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm4518-201ENSMUST00000182638 718 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.22□□□□□ -0.13
Hcn3O88705 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.22□□□□□ -0.13
Hcn3O88705 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn3O88705 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms