Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Cops3O88543 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Cops3O88543 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cops3O88543 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cops3O88543 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cops3O88543 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cops3O88543 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cops3O88543 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.33□□□□□ -0.28
Cops3O88543 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cops3O88543 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cops3O88543 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cops3O88543 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Cops3O88543 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cops3O88543 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cops3O88543 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Cops3O88543 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cops3O88543 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cops3O88543 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.32□□□□□ -0.28
Cops3O88543 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.32□□□□□ -0.28
Cops3O88543 Gm6296-201ENSMUST00000222599 943 ntBASIC13.32□□□□□ -0.28
Cops3O88543 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.32□□□□□ -0.28
Cops3O88543 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.32□□□□□ -0.28
Cops3O88543 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cops3O88543 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Cops3O88543 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.31□□□□□ -0.28
Cops3O88543 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cops3O88543 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cops3O88543 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cops3O88543 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cops3O88543 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cops3O88543 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.31□□□□□ -0.28
Cops3O88543 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cops3O88543 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cops3O88543 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.3□□□□□ -0.28
Cops3O88543 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.3□□□□□ -0.28
Cops3O88543 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms