Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Dnmt3bO88509 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.35□□□□□ -0.11
Dnmt3bO88509 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.35□□□□□ -0.11
Dnmt3bO88509 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Gm8097-201ENSMUST00000117903 829 ntBASIC14.35□□□□□ -0.11
Dnmt3bO88509 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Gm25406-201ENSMUST00000157599 105 ntBASIC14.35□□□□□ -0.11
Dnmt3bO88509 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Gm27628-201ENSMUST00000184911 107 ntBASIC14.35□□□□□ -0.11
Dnmt3bO88509 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.35□□□□□ -0.11
Dnmt3bO88509 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Dnmt3bO88509 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.34□□□□□ -0.11
Dnmt3bO88509 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.34□□□□□ -0.11
Dnmt3bO88509 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Dnmt3bO88509 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.34□□□□□ -0.11
Dnmt3bO88509 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Dnmt3bO88509 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dnmt3bO88509 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dnmt3bO88509 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Dnmt3bO88509 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dnmt3bO88509 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Dnmt3bO88509 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
Dnmt3bO88509 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms