Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a1O88207 Gm15198-201ENSMUST00000117283 177 ntBASIC13.23□□□□□ -0.29
Col5a1O88207 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.23□□□□□ -0.29
Col5a1O88207 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a1O88207 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.23□□□□□ -0.29
Col5a1O88207 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.23□□□□□ -0.29
Col5a1O88207 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a1O88207 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a1O88207 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col5a1O88207 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Col5a1O88207 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.23□□□□□ -0.29
Col5a1O88207 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.23□□□□□ -0.29
Col5a1O88207 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Gm45453-201ENSMUST00000211758 853 ntBASIC13.23□□□□□ -0.29
Col5a1O88207 Gm9182-201ENSMUST00000217829 639 ntBASIC13.23□□□□□ -0.29
Col5a1O88207 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col5a1O88207 Mir125a-201ENSMUST00000083545 68 ntBASIC13.23□□□□□ -0.29
Col5a1O88207 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col5a1O88207 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col5a1O88207 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Col5a1O88207 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.22□□□□□ -0.29
Col5a1O88207 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.22□□□□□ -0.29
Col5a1O88207 Mir1897-201ENSMUST00000122581 272 ntBASIC13.22□□□□□ -0.29
Col5a1O88207 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.22□□□□□ -0.29
Col5a1O88207 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.22□□□□□ -0.29
Col5a1O88207 Mir1982-201ENSMUST00000157368 74 ntBASIC13.22□□□□□ -0.29
Col5a1O88207 Gm17420-201ENSMUST00000164753 153 ntBASIC13.22□□□□□ -0.29
Col5a1O88207 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.22□□□□□ -0.29
Col5a1O88207 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col5a1O88207 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col5a1O88207 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.21□□□□□ -0.29
Col5a1O88207 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col5a1O88207 Gm9002-201ENSMUST00000178437 499 ntBASIC13.21□□□□□ -0.29
Col5a1O88207 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.21□□□□□ -0.29
Col5a1O88207 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col5a1O88207 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a1O88207 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a1O88207 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col5a1O88207 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a1O88207 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col5a1O88207 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col5a1O88207 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col5a1O88207 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm12390-201ENSMUST00000117897 397 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col5a1O88207 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm28760-201ENSMUST00000185995 736 ntBASIC13.2□□□□□ -0.3
Col5a1O88207 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col5a1O88207 Gm10766-202ENSMUST00000194123 606 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms