Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19■□□□□ 0.63
Ubr1O70481 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubr1O70481 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ubr1O70481 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
Ubr1O70481 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ubr1O70481 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.99■□□□□ 0.63
Ubr1O70481 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.99■□□□□ 0.63
Ubr1O70481 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ubr1O70481 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ubr1O70481 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.99■□□□□ 0.63
Ubr1O70481 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ubr1O70481 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubr1O70481 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ubr1O70481 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Ubr1O70481 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.98■□□□□ 0.63
Ubr1O70481 Gm11918-201ENSMUST00000121660 179 ntBASIC18.98■□□□□ 0.63
Ubr1O70481 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.98■□□□□ 0.63
Ubr1O70481 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.98■□□□□ 0.63
Ubr1O70481 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.98■□□□□ 0.63
Ubr1O70481 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.98■□□□□ 0.63
Ubr1O70481 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ubr1O70481 Gm25857-201ENSMUST00000082788 129 ntBASIC18.98■□□□□ 0.63
Ubr1O70481 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Gm5354-201ENSMUST00000182417 973 ntBASIC18.98■□□□□ 0.63
Ubr1O70481 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Ubr1O70481 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ubr1O70481 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubr1O70481 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.98■□□□□ 0.63
Ubr1O70481 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Ubr1O70481 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.98■□□□□ 0.63
Ubr1O70481 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.97■□□□□ 0.63
Ubr1O70481 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.97■□□□□ 0.63
Ubr1O70481 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.97■□□□□ 0.63
Ubr1O70481 Gm18187-201ENSMUST00000196476 984 ntBASIC18.97■□□□□ 0.63
Ubr1O70481 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.97■□□□□ 0.63
Ubr1O70481 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.97■□□□□ 0.63
Ubr1O70481 Gm19220-201ENSMUST00000222682 803 ntBASIC18.97■□□□□ 0.63
Ubr1O70481 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ubr1O70481 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ubr1O70481 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Gm12882-201ENSMUST00000121696 517 ntBASIC18.96■□□□□ 0.63
Ubr1O70481 Gm27701-201ENSMUST00000184498 110 ntBASIC18.96■□□□□ 0.63
Ubr1O70481 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.96■□□□□ 0.63
Ubr1O70481 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.96■□□□□ 0.63
Ubr1O70481 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.96■□□□□ 0.63
Ubr1O70481 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms