Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Gm12998-201ENSMUST00000122445 789 ntBASIC13.33□□□□□ -0.28
Dkk1O54908 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Gm37724-201ENSMUST00000195240 1221 ntBASIC13.33□□□□□ -0.28
Dkk1O54908 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Gm10060-201ENSMUST00000212002 111 ntBASIC13.33□□□□□ -0.28
Dkk1O54908 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.33□□□□□ -0.28
Dkk1O54908 AC122924.1-201ENSMUST00000222044 163 ntBASIC13.33□□□□□ -0.28
Dkk1O54908 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Dkk1O54908 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Dkk1O54908 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Dkk1O54908 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dkk1O54908 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Gm45719-201ENSMUST00000207954 1662 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Gm5682-201ENSMUST00000173402 505 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Gm16456-201ENSMUST00000174431 920 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Mir6374-201ENSMUST00000184003 107 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 1700125H20Rik-201ENSMUST00000018623 966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Gm29543-201ENSMUST00000188138 967 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Gm28437-201ENSMUST00000190277 783 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Gm42454-201ENSMUST00000196805 1181 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC13.32□□□□□ -0.28
Dkk1O54908 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.32□□□□□ -0.28
Dkk1O54908 Gm34165-201ENSMUST00000222012 1174 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Gm8177-201ENSMUST00000181591 1336 ntBASIC13.32□□□□□ -0.28
Dkk1O54908 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Dkk1O54908 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dkk1O54908 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.31□□□□□ -0.28
Dkk1O54908 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Dkk1O54908 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.31□□□□□ -0.28
Dkk1O54908 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.31□□□□□ -0.28
Dkk1O54908 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.31□□□□□ -0.28
Dkk1O54908 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.31□□□□□ -0.28
Dkk1O54908 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Dkk1O54908 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Dkk1O54908 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Dkk1O54908 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Dkk1O54908 Gm20915-201ENSMUST00000191575 663 ntBASIC13.31□□□□□ -0.28
Dkk1O54908 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms