Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Sptlc1O35704 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Sptlc1O35704 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Prob1-201ENSMUST00000097619 3021 ntBASIC16.29■□□□□ 0.2
Sptlc1O35704 Gm8410-201ENSMUST00000117225 605 ntBASIC16.29■□□□□ 0.2
Sptlc1O35704 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC16.29■□□□□ 0.2
Sptlc1O35704 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Gm27989-201ENSMUST00000184721 107 ntBASIC16.29■□□□□ 0.2
Sptlc1O35704 Mir6977-201ENSMUST00000184960 64 ntBASIC16.29■□□□□ 0.2
Sptlc1O35704 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.29■□□□□ 0.2
Sptlc1O35704 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Gm18377-201ENSMUST00000215141 607 ntBASIC16.29■□□□□ 0.2
Sptlc1O35704 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.29■□□□□ 0.2
Sptlc1O35704 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sptlc1O35704 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sptlc1O35704 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.28■□□□□ 0.2
Sptlc1O35704 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.28■□□□□ 0.2
Sptlc1O35704 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.28■□□□□ 0.2
Sptlc1O35704 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.28■□□□□ 0.2
Sptlc1O35704 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sptlc1O35704 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sptlc1O35704 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sptlc1O35704 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.27■□□□□ 0.2
Sptlc1O35704 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sptlc1O35704 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sptlc1O35704 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sptlc1O35704 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sptlc1O35704 Gm27437-201ENSMUST00000183429 107 ntBASIC16.27■□□□□ 0.2
Sptlc1O35704 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.27■□□□□ 0.2
Sptlc1O35704 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sptlc1O35704 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sptlc1O35704 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.27■□□□□ 0.2
Sptlc1O35704 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sptlc1O35704 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.27■□□□□ 0.19
Sptlc1O35704 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.19
Sptlc1O35704 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sptlc1O35704 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Sptlc1O35704 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sptlc1O35704 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sptlc1O35704 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sptlc1O35704 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sptlc1O35704 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sptlc1O35704 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sptlc1O35704 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.27■□□□□ 0.19
Sptlc1O35704 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sptlc1O35704 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sptlc1O35704 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sptlc1O35704 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sptlc1O35704 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sptlc1O35704 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sptlc1O35704 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms