Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ndufa1O35683 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.69□□□□□ -0.7
Ndufa1O35683 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.69□□□□□ -0.7
Ndufa1O35683 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Gm6257-201ENSMUST00000163864 910 ntBASIC10.69□□□□□ -0.7
Ndufa1O35683 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Ndufa1O35683 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ndufa1O35683 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ndufa1O35683 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ndufa1O35683 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Mir770-201ENSMUST00000103252 94 ntBASIC10.68□□□□□ -0.7
Ndufa1O35683 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.68□□□□□ -0.7
Ndufa1O35683 Gm5587-201ENSMUST00000206270 674 ntBASIC10.68□□□□□ -0.7
Ndufa1O35683 AC121577.1-201ENSMUST00000227302 707 ntBASIC10.68□□□□□ -0.7
Ndufa1O35683 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ndufa1O35683 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ndufa1O35683 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.68□□□□□ -0.7
Ndufa1O35683 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ndufa1O35683 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ndufa1O35683 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ndufa1O35683 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ndufa1O35683 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms