Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Gm27300-201ENSMUST00000184085 97 ntBASIC14.31□□□□□ -0.12
Clk4O35493 Gm27335-201ENSMUST00000184758 97 ntBASIC14.31□□□□□ -0.12
Clk4O35493 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.31□□□□□ -0.12
Clk4O35493 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.31□□□□□ -0.12
Clk4O35493 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.31□□□□□ -0.12
Clk4O35493 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.31□□□□□ -0.12
Clk4O35493 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.31□□□□□ -0.12
Clk4O35493 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Clk4O35493 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clk4O35493 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Clk4O35493 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clk4O35493 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clk4O35493 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Clk4O35493 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Clk4O35493 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Clk4O35493 Gm10499-201ENSMUST00000174094 934 ntBASIC14.3□□□□□ -0.12
Clk4O35493 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.3□□□□□ -0.12
Clk4O35493 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.3□□□□□ -0.12
Clk4O35493 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.3□□□□□ -0.12
Clk4O35493 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.3□□□□□ -0.12
Clk4O35493 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clk4O35493 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clk4O35493 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk4O35493 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk4O35493 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Clk4O35493 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clk4O35493 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.29□□□□□ -0.12
Clk4O35493 Mir8117-201ENSMUST00000184773 107 ntBASIC14.29□□□□□ -0.12
Clk4O35493 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.29□□□□□ -0.12
Clk4O35493 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk4O35493 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk4O35493 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.29□□□□□ -0.12
Clk4O35493 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk4O35493 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clk4O35493 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk4O35493 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clk4O35493 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Clk4O35493 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Clk4O35493 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clk4O35493 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Clk4O35493 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.28□□□□□ -0.12
Clk4O35493 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Clk4O35493 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Clk4O35493 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 AW822252-206ENSMUST00000208904 237 ntBASIC14.28□□□□□ -0.12
Clk4O35493 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.28□□□□□ -0.12
Clk4O35493 Gm18246-201ENSMUST00000221023 728 ntBASIC14.28□□□□□ -0.12
Clk4O35493 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Clk4O35493 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk4O35493 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms