Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Gm15427-201ENSMUST00000117288 531 ntBASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Gm2272-201ENSMUST00000194903 582 ntBASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Gm43767-201ENSMUST00000198933 381 ntBASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.36□□□□□ -0.59
Gm10553J3QPF1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm10553J3QPF1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Gm6736-201ENSMUST00000166583 948 ntBASIC11.35□□□□□ -0.59
Gm10553J3QPF1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Gm10553J3QPF1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Gm43575-201ENSMUST00000196420 516 ntBASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Gm10553J3QPF1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms