Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm8097-201ENSMUST00000117903 829 ntBASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Gm17807-201ENSMUST00000186869 298 ntBASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh1F7BJK1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Gm27646-201ENSMUST00000183989 110 ntBASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh1F7BJK1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms