Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb9E9Q5G2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Gm9726-201ENSMUST00000180321 678 ntBASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Olfr286-202ENSMUST00000205305 969 ntBASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb9E9Q5G2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb9E9Q5G2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb9E9Q5G2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Mir449b-201ENSMUST00000104833 80 ntBASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Gm45098-201ENSMUST00000207179 657 ntBASIC17.42■□□□□ 0.38
Pcdhb9E9Q5G2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms