Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Gm12969-201ENSMUST00000120199 1004 ntBASIC8.14□□□□□ -1.11
Herc1E9PZP8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Gm7666-201ENSMUST00000146631 819 ntBASIC8.14□□□□□ -1.11
Herc1E9PZP8 Gm7029-201ENSMUST00000173226 450 ntBASIC8.14□□□□□ -1.11
Herc1E9PZP8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC8.14□□□□□ -1.11
Herc1E9PZP8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC8.14□□□□□ -1.11
Herc1E9PZP8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Herc1E9PZP8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm6335-201ENSMUST00000118081 1194 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm15240-201ENSMUST00000118156 720 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm7816-201ENSMUST00000119884 1194 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm15542-201ENSMUST00000121585 1194 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm7902-201ENSMUST00000198842 947 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm18393-201ENSMUST00000208349 1131 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm26927-201ENSMUST00000182385 965 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm18473-201ENSMUST00000220543 868 ntBASIC8.13□□□□□ -1.11
Herc1E9PZP8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Herc1E9PZP8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm21038-201ENSMUST00000222205 1383 ntBASIC8.12□□□□□ -1.11
Herc1E9PZP8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm12948-201ENSMUST00000119406 682 ntBASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm13408-201ENSMUST00000119822 798 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms