Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Gm28043E0CXC2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Gm6296-201ENSMUST00000222599 943 ntBASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Gm28043E0CXC2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Gm28043E0CXC2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms