Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp42B2RQC2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp42B2RQC2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp42B2RQC2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.34■□□□□ 0.37
Usp42B2RQC2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.34■□□□□ 0.37
Usp42B2RQC2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.34■□□□□ 0.37
Usp42B2RQC2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp42B2RQC2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp42B2RQC2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp42B2RQC2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp42B2RQC2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp42B2RQC2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Usp42B2RQC2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Gm11745-201ENSMUST00000121669 448 ntBASIC17.33■□□□□ 0.36
Usp42B2RQC2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.33■□□□□ 0.36
Usp42B2RQC2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.33■□□□□ 0.36
Usp42B2RQC2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.33■□□□□ 0.36
Usp42B2RQC2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Usp42B2RQC2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Usp42B2RQC2 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.32■□□□□ 0.36
Usp42B2RQC2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp42B2RQC2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Gm27494-201ENSMUST00000184735 189 ntBASIC17.32■□□□□ 0.36
Usp42B2RQC2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Usp42B2RQC2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.32■□□□□ 0.36
Usp42B2RQC2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Usp42B2RQC2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp42B2RQC2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms