Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.94■□□□□ 0.14
Sh2d4bA6X942 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.93■□□□□ 0.14
Sh2d4bA6X942 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.93■□□□□ 0.14
Sh2d4bA6X942 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Gm18057-201ENSMUST00000208220 503 ntBASIC15.92■□□□□ 0.14
Sh2d4bA6X942 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Gm18246-201ENSMUST00000221023 728 ntBASIC15.92■□□□□ 0.14
Sh2d4bA6X942 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Sh2d4bA6X942 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 App-207ENSMUST00000227737 2827 ntBASIC15.91■□□□□ 0.14
Sh2d4bA6X942 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Gm25287-201ENSMUST00000103846 110 ntBASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Gm22918-201ENSMUST00000103855 110 ntBASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sh2d4bA6X942 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sh2d4bA6X942 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh2d4bA6X942 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh2d4bA6X942 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh2d4bA6X942 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh2d4bA6X942 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.9■□□□□ 0.14
Sh2d4bA6X942 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms