Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm21873-201ENSMUST00000186728 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21794-201ENSMUST00000187056 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21880-201ENSMUST00000187275 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21826-201ENSMUST00000187451 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21198-201ENSMUST00000188393 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21749-201ENSMUST00000189343 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21901-201ENSMUST00000189568 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm29424-201ENSMUST00000189716 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm28599-201ENSMUST00000189838 694 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21867-201ENSMUST00000189917 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm29269-201ENSMUST00000190087 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21722-201ENSMUST00000190153 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm28423-201ENSMUST00000190701 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21899-201ENSMUST00000190745 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21910-201ENSMUST00000191163 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21849-201ENSMUST00000191571 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm28678-201ENSMUST00000191593 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm20910-201ENSMUST00000193268 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm21871-201ENSMUST00000194621 696 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm42627-201ENSMUST00000197347 224 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm43378-201ENSMUST00000199336 582 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.93□□□□□ -0.5
Chd6A3KFM7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Chd6A3KFM7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Gm43058-201ENSMUST00000197645 625 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Gm6082-201ENSMUST00000215204 454 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Gm14381-201ENSMUST00000122105 414 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Mir5120-201ENSMUST00000175020 78 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Gm37835-201ENSMUST00000193305 361 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Gm42997-202ENSMUST00000200321 985 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.92□□□□□ -0.5
Chd6A3KFM7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Chd6A3KFM7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chd6A3KFM7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Gm8959-201ENSMUST00000213150 571 ntBASIC11.91□□□□□ -0.5
Chd6A3KFM7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.91□□□□□ -0.5
Chd6A3KFM7 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.91□□□□□ -0.5
Chd6A3KFM7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.91□□□□□ -0.5
Chd6A3KFM7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chd6A3KFM7 Gm45453-201ENSMUST00000211758 853 ntBASIC11.91□□□□□ -0.5
Chd6A3KFM7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms