Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.52□□□□□ -0.41
Col6a4A2AX52 Gm4875-201ENSMUST00000118257 786 ntBASIC12.52□□□□□ -0.41
Col6a4A2AX52 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.52□□□□□ -0.41
Col6a4A2AX52 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Col6a4A2AX52 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm13829-201ENSMUST00000119600 138 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm18018-201ENSMUST00000198273 408 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm8602-201ENSMUST00000184045 607 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.51□□□□□ -0.41
Col6a4A2AX52 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col6a4A2AX52 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm14042-201ENSMUST00000120139 833 ntBASIC12.5□□□□□ -0.41
Col6a4A2AX52 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm45668-201ENSMUST00000211271 493 ntBASIC12.5□□□□□ -0.41
Col6a4A2AX52 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.5□□□□□ -0.41
Col6a4A2AX52 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm9719-201ENSMUST00000162765 543 ntBASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm6745-201ENSMUST00000199216 526 ntBASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.5□□□□□ -0.41
Col6a4A2AX52 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col6a4A2AX52 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Gm11918-201ENSMUST00000121660 179 ntBASIC12.49□□□□□ -0.41
Col6a4A2AX52 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.49□□□□□ -0.41
Col6a4A2AX52 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms