Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm12134-201ENSMUST00000122109 520 ntBASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms