Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Gm9726-201ENSMUST00000180321 678 ntBASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Olfr286-202ENSMUST00000205305 969 ntBASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Atg4a-psA0A0G2JFS9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.99■□□□□ 0.47
Atg4a-psA0A0G2JFS9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms