Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Mir8117-201ENSMUST00000184773 107 ntBASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav6-4A0A075B6B4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Gm15467-201ENSMUST00000120582 445 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Gm13597-201ENSMUST00000121239 375 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 AW822252-206ENSMUST00000208904 237 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-4A0A075B6B4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-4A0A075B6B4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms