Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav6n-6A0A075B6B2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm12895-201ENSMUST00000122214 226 ntBASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Matn2-206ENSMUST00000228570 2798 ntBASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav6n-6A0A075B6B2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav6n-6A0A075B6B2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms