Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm14722-201ENSMUST00000118943 689 ntBASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm6089-201ENSMUST00000197666 938 ntBASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6d-7A0A075B6B0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm1401-201ENSMUST00000122048 772 ntBASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Mir5126-201ENSMUST00000175513 77 ntBASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm6550-201ENSMUST00000187574 993 ntBASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav6d-7A0A075B6B0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm12350-201ENSMUST00000121208 462 ntBASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 AW822252-206ENSMUST00000208904 237 ntBASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 AV026068-213ENSMUST00000223675 1171 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms