Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav8-1A0A075B641 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav8-1A0A075B641 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Gm11539-201ENSMUST00000119837 557 ntBASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Gm20760-201ENSMUST00000179197 648 ntBASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Gm3375-201ENSMUST00000203929 796 ntBASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Trav8-1A0A075B641 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav8-1A0A075B641 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms