Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm25349-201ENSMUST00000177728 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm23616-201ENSMUST00000177797 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm25871-201ENSMUST00000177816 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24752-201ENSMUST00000178240 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24496-201ENSMUST00000178287 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm25649-201ENSMUST00000178476 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm25548-201ENSMUST00000178681 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm23147-201ENSMUST00000178841 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm26095-201ENSMUST00000179270 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm22171-201ENSMUST00000179283 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm23936-201ENSMUST00000179354 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm22619-201ENSMUST00000179516 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm25255-201ENSMUST00000179579 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24755-201ENSMUST00000179691 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm26506-201ENSMUST00000179692 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm25086-201ENSMUST00000179931 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm23243-201ENSMUST00000180047 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24659-201ENSMUST00000180212 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm24169-201ENSMUST00000180244 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm23689-201ENSMUST00000180354 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm27920-201ENSMUST00000183953 96 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm27359-201ENSMUST00000184153 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm27785-201ENSMUST00000184268 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm27466-201ENSMUST00000184396 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm27703-201ENSMUST00000184836 110 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm10253-201ENSMUST00000194270 940 ntBASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-1A0A075B5Z7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm15920-201ENSMUST00000118998 402 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm13464-201ENSMUST00000119418 935 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm15483-201ENSMUST00000120338 456 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms