Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smarcb1Q9Z0H3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smarcb1Q9Z0H3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Smarcb1Q9Z0H3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smarcb1Q9Z0H3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Smarcb1Q9Z0H3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.35■■□□□ 1.33
Smarcb1Q9Z0H3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcb1Q9Z0H3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcb1Q9Z0H3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcb1Q9Z0H3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcb1Q9Z0H3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcb1Q9Z0H3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Smarcb1Q9Z0H3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Smarcb1Q9Z0H3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Smarcb1Q9Z0H3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smarcb1Q9Z0H3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Smarcb1Q9Z0H3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Smarcb1Q9Z0H3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smarcb1Q9Z0H3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smarcb1Q9Z0H3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smarcb1Q9Z0H3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Smarcb1Q9Z0H3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.3■■□□□ 1.32
Smarcb1Q9Z0H3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smarcb1Q9Z0H3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smarcb1Q9Z0H3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.29■■□□□ 1.32
Smarcb1Q9Z0H3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smarcb1Q9Z0H3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smarcb1Q9Z0H3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smarcb1Q9Z0H3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Smarcb1Q9Z0H3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Smarcb1Q9Z0H3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Smarcb1Q9Z0H3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smarcb1Q9Z0H3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smarcb1Q9Z0H3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Smarcb1Q9Z0H3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smarcb1Q9Z0H3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smarcb1Q9Z0H3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.25■■□□□ 1.31
Smarcb1Q9Z0H3 Gm5812-201ENSMUST00000061073 957 ntBASIC23.25■■□□□ 1.31
Smarcb1Q9Z0H3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smarcb1Q9Z0H3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Smarcb1Q9Z0H3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smarcb1Q9Z0H3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.24■■□□□ 1.31
Smarcb1Q9Z0H3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.24■■□□□ 1.31
Smarcb1Q9Z0H3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Smarcb1Q9Z0H3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Smarcb1Q9Z0H3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smarcb1Q9Z0H3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
Smarcb1Q9Z0H3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.23■■□□□ 1.31
Smarcb1Q9Z0H3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smarcb1Q9Z0H3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smarcb1Q9Z0H3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Smarcb1Q9Z0H3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Smarcb1Q9Z0H3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smarcb1Q9Z0H3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Gm43566-201ENSMUST00000196851 808 ntBASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Gm45444-201ENSMUST00000211394 898 ntBASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Smarcb1Q9Z0H3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smarcb1Q9Z0H3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Smarcb1Q9Z0H3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.19■■□□□ 1.3
Smarcb1Q9Z0H3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
Smarcb1Q9Z0H3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Smarcb1Q9Z0H3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.19■■□□□ 1.3
Smarcb1Q9Z0H3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.18■■□□□ 1.3
Smarcb1Q9Z0H3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Smarcb1Q9Z0H3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Smarcb1Q9Z0H3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Smarcb1Q9Z0H3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smarcb1Q9Z0H3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Smarcb1Q9Z0H3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Smarcb1Q9Z0H3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Smarcb1Q9Z0H3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms