Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh17Q9R100 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.78■■□□□ 1.08
Cdh17Q9R100 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh17Q9R100 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.78■■□□□ 1.08
Cdh17Q9R100 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdh17Q9R100 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.77■■□□□ 1.08
Cdh17Q9R100 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdh17Q9R100 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.77■■□□□ 1.08
Cdh17Q9R100 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.77■■□□□ 1.08
Cdh17Q9R100 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cdh17Q9R100 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh17Q9R100 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh17Q9R100 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cdh17Q9R100 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh17Q9R100 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh17Q9R100 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh17Q9R100 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.75■■□□□ 1.07
Cdh17Q9R100 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh17Q9R100 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.75■■□□□ 1.07
Cdh17Q9R100 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.75■■□□□ 1.07
Cdh17Q9R100 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh17Q9R100 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Cdh17Q9R100 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.75■■□□□ 1.07
Cdh17Q9R100 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh17Q9R100 Mir3960-201ENSMUST00000198213 73 ntBASIC21.74■■□□□ 1.07
Cdh17Q9R100 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.74■■□□□ 1.07
Cdh17Q9R100 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Cdh17Q9R100 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh17Q9R100 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh17Q9R100 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh17Q9R100 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Cdh17Q9R100 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.73■■□□□ 1.07
Cdh17Q9R100 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cdh17Q9R100 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Cdh17Q9R100 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.73■■□□□ 1.07
Cdh17Q9R100 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.73■■□□□ 1.07
Cdh17Q9R100 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cdh17Q9R100 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh17Q9R100 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh17Q9R100 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh17Q9R100 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh17Q9R100 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdh17Q9R100 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh17Q9R100 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh17Q9R100 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh17Q9R100 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh17Q9R100 Gm7432-201ENSMUST00000210343 879 ntBASIC21.72■■□□□ 1.07
Cdh17Q9R100 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh17Q9R100 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.72■■□□□ 1.07
Cdh17Q9R100 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh17Q9R100 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh17Q9R100 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh17Q9R100 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh17Q9R100 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh17Q9R100 Gm45364-201ENSMUST00000210883 159 ntBASIC21.71■■□□□ 1.07
Cdh17Q9R100 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh17Q9R100 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh17Q9R100 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh17Q9R100 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh17Q9R100 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Cdh17Q9R100 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh17Q9R100 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh17Q9R100 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh17Q9R100 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh17Q9R100 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.68■■□□□ 1.06
Cdh17Q9R100 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Cdh17Q9R100 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh17Q9R100 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh17Q9R100 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh17Q9R100 Gm11599-201ENSMUST00000118720 878 ntBASIC21.67■■□□□ 1.06
Cdh17Q9R100 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh17Q9R100 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh17Q9R100 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh17Q9R100 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdh17Q9R100 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh17Q9R100 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh17Q9R100 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh17Q9R100 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh17Q9R100 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh17Q9R100 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh17Q9R100 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.65■■□□□ 1.06
Cdh17Q9R100 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh17Q9R100 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh17Q9R100 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Cdh17Q9R100 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Cdh17Q9R100 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh17Q9R100 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cdh17Q9R100 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Cdh17Q9R100 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh17Q9R100 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh17Q9R100 Terc-201ENSMUST00000082862 423 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms