Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Cpsf1Q9EPU4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cpsf1Q9EPU4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.57■■■□□ 2.64
Cpsf1Q9EPU4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cpsf1Q9EPU4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Cpsf1Q9EPU4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cpsf1Q9EPU4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cpsf1Q9EPU4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.56■■■□□ 2.64
Cpsf1Q9EPU4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.55■■■□□ 2.64
Cpsf1Q9EPU4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC31.55■■■□□ 2.64
Cpsf1Q9EPU4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC31.54■■■□□ 2.64
Cpsf1Q9EPU4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cpsf1Q9EPU4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC31.53■■■□□ 2.64
Cpsf1Q9EPU4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cpsf1Q9EPU4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cpsf1Q9EPU4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Cpsf1Q9EPU4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cpsf1Q9EPU4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cpsf1Q9EPU4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cpsf1Q9EPU4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Cpsf1Q9EPU4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
Cpsf1Q9EPU4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Cpsf1Q9EPU4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Cpsf1Q9EPU4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Cpsf1Q9EPU4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cpsf1Q9EPU4 Gm5921-201ENSMUST00000075898 882 ntBASIC31.49■■■□□ 2.63
Cpsf1Q9EPU4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cpsf1Q9EPU4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cpsf1Q9EPU4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC31.48■■■□□ 2.63
Cpsf1Q9EPU4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Cpsf1Q9EPU4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cpsf1Q9EPU4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
Cpsf1Q9EPU4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cpsf1Q9EPU4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cpsf1Q9EPU4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cpsf1Q9EPU4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cpsf1Q9EPU4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cpsf1Q9EPU4 AC117769.4-201ENSMUST00000225679 685 ntBASIC31.46■■■□□ 2.63
Cpsf1Q9EPU4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Cpsf1Q9EPU4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cpsf1Q9EPU4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Cpsf1Q9EPU4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cpsf1Q9EPU4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
Cpsf1Q9EPU4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cpsf1Q9EPU4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC31.43■■■□□ 2.62
Cpsf1Q9EPU4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cpsf1Q9EPU4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cpsf1Q9EPU4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cpsf1Q9EPU4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cpsf1Q9EPU4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cpsf1Q9EPU4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC31.41■■■□□ 2.62
Cpsf1Q9EPU4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cpsf1Q9EPU4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cpsf1Q9EPU4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cpsf1Q9EPU4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cpsf1Q9EPU4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cpsf1Q9EPU4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC31.39■■■□□ 2.62
Cpsf1Q9EPU4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cpsf1Q9EPU4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cpsf1Q9EPU4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cpsf1Q9EPU4 Gm5812-201ENSMUST00000061073 957 ntBASIC31.37■■■□□ 2.61
Cpsf1Q9EPU4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
Cpsf1Q9EPU4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Cpsf1Q9EPU4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Cpsf1Q9EPU4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Cpsf1Q9EPU4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Cpsf1Q9EPU4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cpsf1Q9EPU4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cpsf1Q9EPU4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cpsf1Q9EPU4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cpsf1Q9EPU4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cpsf1Q9EPU4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Cpsf1Q9EPU4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cpsf1Q9EPU4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Cpsf1Q9EPU4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Cpsf1Q9EPU4 Gm43592-201ENSMUST00000196922 1165 ntBASIC31.34■■■□□ 2.61
Cpsf1Q9EPU4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC31.32■■■□□ 2.61
Cpsf1Q9EPU4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.32■■■□□ 2.61
Cpsf1Q9EPU4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Cpsf1Q9EPU4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cpsf1Q9EPU4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cpsf1Q9EPU4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cpsf1Q9EPU4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cpsf1Q9EPU4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC31.29■■■□□ 2.6
Cpsf1Q9EPU4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cpsf1Q9EPU4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cpsf1Q9EPU4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC31.29■■■□□ 2.6
Cpsf1Q9EPU4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cpsf1Q9EPU4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC31.27■■■□□ 2.6
Cpsf1Q9EPU4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Cpsf1Q9EPU4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Cpsf1Q9EPU4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC31.25■■■□□ 2.59
Cpsf1Q9EPU4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cpsf1Q9EPU4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Cpsf1Q9EPU4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Cpsf1Q9EPU4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cpsf1Q9EPU4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cpsf1Q9EPU4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Cpsf1Q9EPU4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cpsf1Q9EPU4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms