Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
StrcQ8VIM6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
StrcQ8VIM6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
StrcQ8VIM6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
StrcQ8VIM6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.82■■■□□ 2.04
StrcQ8VIM6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
StrcQ8VIM6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC27.82■■■□□ 2.04
StrcQ8VIM6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC27.82■■■□□ 2.04
StrcQ8VIM6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC27.81■■■□□ 2.04
StrcQ8VIM6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
StrcQ8VIM6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
StrcQ8VIM6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
StrcQ8VIM6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
StrcQ8VIM6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC27.8■■■□□ 2.04
StrcQ8VIM6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC27.8■■■□□ 2.04
StrcQ8VIM6 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.8■■■□□ 2.04
StrcQ8VIM6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
StrcQ8VIM6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC27.79■■■□□ 2.04
StrcQ8VIM6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
StrcQ8VIM6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
StrcQ8VIM6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
StrcQ8VIM6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC27.78■■■□□ 2.04
StrcQ8VIM6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
StrcQ8VIM6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
StrcQ8VIM6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
StrcQ8VIM6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.04
StrcQ8VIM6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC27.76■■■□□ 2.04
StrcQ8VIM6 Gm5131-201ENSMUST00000212776 1238 ntBASIC27.76■■■□□ 2.04
StrcQ8VIM6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.04
StrcQ8VIM6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
StrcQ8VIM6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
StrcQ8VIM6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.75■■■□□ 2.03
StrcQ8VIM6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
StrcQ8VIM6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
StrcQ8VIM6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
StrcQ8VIM6 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
StrcQ8VIM6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC27.74■■■□□ 2.03
StrcQ8VIM6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
StrcQ8VIM6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
StrcQ8VIM6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
StrcQ8VIM6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC27.73■■■□□ 2.03
StrcQ8VIM6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
StrcQ8VIM6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC27.72■■■□□ 2.03
StrcQ8VIM6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
StrcQ8VIM6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
StrcQ8VIM6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
StrcQ8VIM6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
StrcQ8VIM6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
StrcQ8VIM6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.03
StrcQ8VIM6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC27.7■■■□□ 2.02
StrcQ8VIM6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
StrcQ8VIM6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
StrcQ8VIM6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
StrcQ8VIM6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
StrcQ8VIM6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
StrcQ8VIM6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
StrcQ8VIM6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
StrcQ8VIM6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
StrcQ8VIM6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.68■■■□□ 2.02
StrcQ8VIM6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
StrcQ8VIM6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC27.67■■■□□ 2.02
StrcQ8VIM6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
StrcQ8VIM6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
StrcQ8VIM6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
StrcQ8VIM6 Gm21956-201ENSMUST00000179946 522 ntBASIC27.67■■■□□ 2.02
StrcQ8VIM6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
StrcQ8VIM6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
StrcQ8VIM6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
StrcQ8VIM6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC27.65■■■□□ 2.02
StrcQ8VIM6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
StrcQ8VIM6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
StrcQ8VIM6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
StrcQ8VIM6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
StrcQ8VIM6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC27.64■■■□□ 2.01
StrcQ8VIM6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
StrcQ8VIM6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
StrcQ8VIM6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
StrcQ8VIM6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
StrcQ8VIM6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
StrcQ8VIM6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC27.61■■■□□ 2.01
StrcQ8VIM6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
StrcQ8VIM6 Etf1-202ENSMUST00000180351 108 ntBASIC27.6■■■□□ 2.01
StrcQ8VIM6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
StrcQ8VIM6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
StrcQ8VIM6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
StrcQ8VIM6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC27.6■■■□□ 2.01
StrcQ8VIM6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
StrcQ8VIM6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
StrcQ8VIM6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC27.59■■■□□ 2.01
StrcQ8VIM6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
StrcQ8VIM6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
StrcQ8VIM6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
StrcQ8VIM6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
StrcQ8VIM6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.58■■■□□ 2.01
StrcQ8VIM6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
StrcQ8VIM6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC27.57■■■□□ 2
StrcQ8VIM6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
StrcQ8VIM6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
StrcQ8VIM6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
StrcQ8VIM6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms