Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scamp1Q8K021 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Scamp1Q8K021 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scamp1Q8K021 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scamp1Q8K021 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scamp1Q8K021 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scamp1Q8K021 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Scamp1Q8K021 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scamp1Q8K021 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Scamp1Q8K021 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scamp1Q8K021 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Scamp1Q8K021 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scamp1Q8K021 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.82■■□□□ 1.08
Scamp1Q8K021 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scamp1Q8K021 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scamp1Q8K021 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scamp1Q8K021 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Scamp1Q8K021 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scamp1Q8K021 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scamp1Q8K021 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scamp1Q8K021 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scamp1Q8K021 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.8■■□□□ 1.08
Scamp1Q8K021 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scamp1Q8K021 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scamp1Q8K021 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.79■■□□□ 1.08
Scamp1Q8K021 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Scamp1Q8K021 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scamp1Q8K021 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Scamp1Q8K021 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scamp1Q8K021 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scamp1Q8K021 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scamp1Q8K021 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.78■■□□□ 1.08
Scamp1Q8K021 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scamp1Q8K021 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scamp1Q8K021 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scamp1Q8K021 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scamp1Q8K021 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scamp1Q8K021 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Scamp1Q8K021 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Scamp1Q8K021 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Scamp1Q8K021 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.76■■□□□ 1.07
Scamp1Q8K021 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scamp1Q8K021 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scamp1Q8K021 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scamp1Q8K021 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scamp1Q8K021 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scamp1Q8K021 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scamp1Q8K021 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scamp1Q8K021 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scamp1Q8K021 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Scamp1Q8K021 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.74■■□□□ 1.07
Scamp1Q8K021 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scamp1Q8K021 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Scamp1Q8K021 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp1Q8K021 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp1Q8K021 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scamp1Q8K021 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scamp1Q8K021 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scamp1Q8K021 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scamp1Q8K021 Gm5921-201ENSMUST00000075898 882 ntBASIC21.71■■□□□ 1.07
Scamp1Q8K021 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Scamp1Q8K021 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.7■■□□□ 1.06
Scamp1Q8K021 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scamp1Q8K021 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scamp1Q8K021 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scamp1Q8K021 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scamp1Q8K021 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scamp1Q8K021 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.68■■□□□ 1.06
Scamp1Q8K021 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scamp1Q8K021 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.67■■□□□ 1.06
Scamp1Q8K021 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scamp1Q8K021 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scamp1Q8K021 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.66■■□□□ 1.06
Scamp1Q8K021 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Scamp1Q8K021 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scamp1Q8K021 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Scamp1Q8K021 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Scamp1Q8K021 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Scamp1Q8K021 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.65■■□□□ 1.06
Scamp1Q8K021 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scamp1Q8K021 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scamp1Q8K021 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp1Q8K021 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.64■■□□□ 1.05
Scamp1Q8K021 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp1Q8K021 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp1Q8K021 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp1Q8K021 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scamp1Q8K021 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Scamp1Q8K021 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scamp1Q8K021 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scamp1Q8K021 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.63■■□□□ 1.05
Scamp1Q8K021 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Scamp1Q8K021 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms