Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc46a2Q8CA03 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slc46a2Q8CA03 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slc46a2Q8CA03 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.47■■□□□ 1.03
Slc46a2Q8CA03 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slc46a2Q8CA03 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Slc46a2Q8CA03 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc46a2Q8CA03 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Slc46a2Q8CA03 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc46a2Q8CA03 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc46a2Q8CA03 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc46a2Q8CA03 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Slc46a2Q8CA03 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc46a2Q8CA03 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.43■■□□□ 1.02
Slc46a2Q8CA03 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.43■■□□□ 1.02
Slc46a2Q8CA03 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc46a2Q8CA03 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc46a2Q8CA03 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Slc46a2Q8CA03 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc46a2Q8CA03 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc46a2Q8CA03 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc46a2Q8CA03 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc46a2Q8CA03 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc46a2Q8CA03 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Slc46a2Q8CA03 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc46a2Q8CA03 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.4■■□□□ 1.02
Slc46a2Q8CA03 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Slc46a2Q8CA03 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.4■■□□□ 1.02
Slc46a2Q8CA03 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Slc46a2Q8CA03 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc46a2Q8CA03 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Slc46a2Q8CA03 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc46a2Q8CA03 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc46a2Q8CA03 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc46a2Q8CA03 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Slc46a2Q8CA03 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc46a2Q8CA03 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.37■■□□□ 1.01
Slc46a2Q8CA03 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.37■■□□□ 1.01
Slc46a2Q8CA03 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc46a2Q8CA03 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc46a2Q8CA03 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc46a2Q8CA03 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc46a2Q8CA03 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Slc46a2Q8CA03 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Slc46a2Q8CA03 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc46a2Q8CA03 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Slc46a2Q8CA03 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc46a2Q8CA03 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.35■■□□□ 1.01
Slc46a2Q8CA03 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc46a2Q8CA03 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc46a2Q8CA03 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Slc46a2Q8CA03 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc46a2Q8CA03 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc46a2Q8CA03 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc46a2Q8CA03 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc46a2Q8CA03 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc46a2Q8CA03 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc46a2Q8CA03 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc46a2Q8CA03 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc46a2Q8CA03 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.33■■□□□ 1.01
Slc46a2Q8CA03 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc46a2Q8CA03 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Slc46a2Q8CA03 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc46a2Q8CA03 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.33■■□□□ 1
Slc46a2Q8CA03 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.32■■□□□ 1
Slc46a2Q8CA03 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc46a2Q8CA03 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.32■■□□□ 1
Slc46a2Q8CA03 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc46a2Q8CA03 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc46a2Q8CA03 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc46a2Q8CA03 Nkain2-201ENSMUST00000092602 558 ntBASIC21.31■■□□□ 1
Slc46a2Q8CA03 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc46a2Q8CA03 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc46a2Q8CA03 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc46a2Q8CA03 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Slc46a2Q8CA03 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc46a2Q8CA03 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc46a2Q8CA03 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc46a2Q8CA03 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc46a2Q8CA03 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc46a2Q8CA03 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc46a2Q8CA03 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Slc46a2Q8CA03 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Slc46a2Q8CA03 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.28■■□□□ 1
Slc46a2Q8CA03 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc46a2Q8CA03 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Slc46a2Q8CA03 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Slc46a2Q8CA03 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc46a2Q8CA03 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc46a2Q8CA03 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.27■□□□□ 0.99
Slc46a2Q8CA03 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc46a2Q8CA03 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc46a2Q8CA03 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms