Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Ptcd1Q8C2E4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ptcd1Q8C2E4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.75■■■□□ 2.03
Ptcd1Q8C2E4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Ptcd1Q8C2E4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.74■■■□□ 2.03
Ptcd1Q8C2E4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC27.74■■■□□ 2.03
Ptcd1Q8C2E4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Ptcd1Q8C2E4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Ptcd1Q8C2E4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC27.73■■■□□ 2.03
Ptcd1Q8C2E4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC27.73■■■□□ 2.03
Ptcd1Q8C2E4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC27.73■■■□□ 2.03
Ptcd1Q8C2E4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.72■■■□□ 2.03
Ptcd1Q8C2E4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ptcd1Q8C2E4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Ptcd1Q8C2E4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Ptcd1Q8C2E4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Ptcd1Q8C2E4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ptcd1Q8C2E4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ptcd1Q8C2E4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ptcd1Q8C2E4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ptcd1Q8C2E4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.69■■■□□ 2.02
Ptcd1Q8C2E4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ptcd1Q8C2E4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.68■■■□□ 2.02
Ptcd1Q8C2E4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ptcd1Q8C2E4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC27.67■■■□□ 2.02
Ptcd1Q8C2E4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ptcd1Q8C2E4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Ptcd1Q8C2E4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.67■■■□□ 2.02
Ptcd1Q8C2E4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ptcd1Q8C2E4 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.66■■■□□ 2.02
Ptcd1Q8C2E4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ptcd1Q8C2E4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
Ptcd1Q8C2E4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ptcd1Q8C2E4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC27.65■■■□□ 2.02
Ptcd1Q8C2E4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC27.65■■■□□ 2.02
Ptcd1Q8C2E4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC27.65■■■□□ 2.02
Ptcd1Q8C2E4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Ptcd1Q8C2E4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC27.64■■■□□ 2.02
Ptcd1Q8C2E4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
Ptcd1Q8C2E4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ptcd1Q8C2E4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ptcd1Q8C2E4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Ptcd1Q8C2E4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Ptcd1Q8C2E4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Ptcd1Q8C2E4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC27.62■■■□□ 2.01
Ptcd1Q8C2E4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ptcd1Q8C2E4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ptcd1Q8C2E4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
Ptcd1Q8C2E4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC27.6■■■□□ 2.01
Ptcd1Q8C2E4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
Ptcd1Q8C2E4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ptcd1Q8C2E4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ptcd1Q8C2E4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Ptcd1Q8C2E4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Ptcd1Q8C2E4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2
Ptcd1Q8C2E4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Ptcd1Q8C2E4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Ptcd1Q8C2E4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.56■■■□□ 2
Ptcd1Q8C2E4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Ptcd1Q8C2E4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC27.56■■■□□ 2
Ptcd1Q8C2E4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC27.56■■■□□ 2
Ptcd1Q8C2E4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ptcd1Q8C2E4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.56■■■□□ 2
Ptcd1Q8C2E4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
Ptcd1Q8C2E4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ptcd1Q8C2E4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ptcd1Q8C2E4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.55■■■□□ 2
Ptcd1Q8C2E4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ptcd1Q8C2E4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Ptcd1Q8C2E4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ptcd1Q8C2E4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Ptcd1Q8C2E4 Etf1-202ENSMUST00000180351 108 ntBASIC27.54■■■□□ 2
Ptcd1Q8C2E4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC27.54■■■□□ 2
Ptcd1Q8C2E4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptcd1Q8C2E4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptcd1Q8C2E4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptcd1Q8C2E4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC27.53■■■□□ 2
Ptcd1Q8C2E4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ptcd1Q8C2E4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ptcd1Q8C2E4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ptcd1Q8C2E4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Ptcd1Q8C2E4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ptcd1Q8C2E4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptcd1Q8C2E4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptcd1Q8C2E4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptcd1Q8C2E4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ptcd1Q8C2E4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Ptcd1Q8C2E4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ptcd1Q8C2E4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC27.48■■□□□ 1.99
Ptcd1Q8C2E4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Ptcd1Q8C2E4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.48■■□□□ 1.99
Ptcd1Q8C2E4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
Ptcd1Q8C2E4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC27.48■■□□□ 1.99
Ptcd1Q8C2E4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Ptcd1Q8C2E4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptcd1Q8C2E4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptcd1Q8C2E4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Ptcd1Q8C2E4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC27.47■■□□□ 1.99
Ptcd1Q8C2E4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ptcd1Q8C2E4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms