Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.69■□□□□ 0.74
Ube3dQ8BX13 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ube3dQ8BX13 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3dQ8BX13 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3dQ8BX13 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3dQ8BX13 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3dQ8BX13 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ube3dQ8BX13 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.68■□□□□ 0.74
Ube3dQ8BX13 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3dQ8BX13 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3dQ8BX13 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3dQ8BX13 Gm9812-201ENSMUST00000061934 968 ntBASIC19.67■□□□□ 0.74
Ube3dQ8BX13 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ube3dQ8BX13 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3dQ8BX13 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ube3dQ8BX13 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3dQ8BX13 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ube3dQ8BX13 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.66■□□□□ 0.74
Ube3dQ8BX13 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3dQ8BX13 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ube3dQ8BX13 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3dQ8BX13 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.65■□□□□ 0.74
Ube3dQ8BX13 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3dQ8BX13 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3dQ8BX13 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.65■□□□□ 0.74
Ube3dQ8BX13 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3dQ8BX13 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ube3dQ8BX13 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ube3dQ8BX13 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ube3dQ8BX13 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.64■□□□□ 0.73
Ube3dQ8BX13 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.64■□□□□ 0.73
Ube3dQ8BX13 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3dQ8BX13 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3dQ8BX13 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3dQ8BX13 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3dQ8BX13 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ube3dQ8BX13 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3dQ8BX13 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3dQ8BX13 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ube3dQ8BX13 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube3dQ8BX13 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ube3dQ8BX13 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.62■□□□□ 0.73
Ube3dQ8BX13 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ube3dQ8BX13 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ube3dQ8BX13 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.6■□□□□ 0.73
Ube3dQ8BX13 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.6■□□□□ 0.73
Ube3dQ8BX13 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube3dQ8BX13 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube3dQ8BX13 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ube3dQ8BX13 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.59■□□□□ 0.73
Ube3dQ8BX13 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ube3dQ8BX13 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.59■□□□□ 0.73
Ube3dQ8BX13 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.58■□□□□ 0.73
Ube3dQ8BX13 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ube3dQ8BX13 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ube3dQ8BX13 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube3dQ8BX13 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Ube3dQ8BX13 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ube3dQ8BX13 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ube3dQ8BX13 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Gm12366-201ENSMUST00000121722 873 ntBASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ube3dQ8BX13 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Gm5786-201ENSMUST00000085368 882 ntBASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3dQ8BX13 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ube3dQ8BX13 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3dQ8BX13 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3dQ8BX13 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3dQ8BX13 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3dQ8BX13 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3dQ8BX13 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ube3dQ8BX13 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ube3dQ8BX13 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Ube3dQ8BX13 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.54■□□□□ 0.72
Ube3dQ8BX13 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms