Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Spg11Q3UHA3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.5■■□□□ 1.03
Spg11Q3UHA3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Spg11Q3UHA3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Spg11Q3UHA3 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.49■■□□□ 1.03
Spg11Q3UHA3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Spg11Q3UHA3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Spg11Q3UHA3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Gm45417-201ENSMUST00000209533 758 ntBASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.48■■□□□ 1.03
Spg11Q3UHA3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.47■■□□□ 1.03
Spg11Q3UHA3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.47■■□□□ 1.03
Spg11Q3UHA3 Gm12821-201ENSMUST00000120022 600 ntBASIC21.47■■□□□ 1.03
Spg11Q3UHA3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 Gm18284-201ENSMUST00000172604 624 ntBASIC21.46■■□□□ 1.03
Spg11Q3UHA3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.46■■□□□ 1.03
Spg11Q3UHA3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Spg11Q3UHA3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Spg11Q3UHA3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Spg11Q3UHA3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Spg11Q3UHA3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Spg11Q3UHA3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Spg11Q3UHA3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Spg11Q3UHA3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Spg11Q3UHA3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.43■■□□□ 1.02
Spg11Q3UHA3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
Spg11Q3UHA3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Spg11Q3UHA3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Spg11Q3UHA3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Spg11Q3UHA3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Spg11Q3UHA3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
Spg11Q3UHA3 Gm22238-201ENSMUST00000175222 88 ntBASIC21.4■■□□□ 1.02
Spg11Q3UHA3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Spg11Q3UHA3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Spg11Q3UHA3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Spg11Q3UHA3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Spg11Q3UHA3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Spg11Q3UHA3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Spg11Q3UHA3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Spg11Q3UHA3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Spg11Q3UHA3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Spg11Q3UHA3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Spg11Q3UHA3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.36■■□□□ 1.01
Spg11Q3UHA3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Spg11Q3UHA3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.35■■□□□ 1.01
Spg11Q3UHA3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Spg11Q3UHA3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Spg11Q3UHA3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.34■■□□□ 1.01
Spg11Q3UHA3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.34■■□□□ 1.01
Spg11Q3UHA3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Spg11Q3UHA3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Spg11Q3UHA3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.33■■□□□ 1
Spg11Q3UHA3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.32■■□□□ 1
Spg11Q3UHA3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Spg11Q3UHA3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Spg11Q3UHA3 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.32■■□□□ 1
Spg11Q3UHA3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Spg11Q3UHA3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Spg11Q3UHA3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Spg11Q3UHA3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Spg11Q3UHA3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Spg11Q3UHA3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Spg11Q3UHA3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Spg11Q3UHA3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.3■■□□□ 1
Spg11Q3UHA3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Spg11Q3UHA3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Spg11Q3UHA3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.3■■□□□ 1
Spg11Q3UHA3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Spg11Q3UHA3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
Spg11Q3UHA3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Spg11Q3UHA3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.29■■□□□ 1
Spg11Q3UHA3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Spg11Q3UHA3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.28■■□□□ 1
Spg11Q3UHA3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.28■■□□□ 1
Spg11Q3UHA3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Spg11Q3UHA3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.28■■□□□ 1
Spg11Q3UHA3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.27■■□□□ 1
Spg11Q3UHA3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.27■■□□□ 1
Spg11Q3UHA3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Spg11Q3UHA3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Spg11Q3UHA3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.27■■□□□ 1
Spg11Q3UHA3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.27■■□□□ 1
Spg11Q3UHA3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Spg11Q3UHA3 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.26■□□□□ 0.99
Spg11Q3UHA3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.26■□□□□ 0.99
Spg11Q3UHA3 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.26■□□□□ 0.99
Spg11Q3UHA3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms