Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3U1D9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3U1D9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q3U1D9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Q3U1D9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Q3U1D9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q3U1D9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q3U1D9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q3U1D9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Q3U1D9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Q3U1D9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3U1D9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3U1D9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Q3U1D9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3U1D9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3U1D9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3U1D9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.37■□□□□ 0.69
Q3U1D9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3U1D9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Q3U1D9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Q3U1D9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q3U1D9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Q3U1D9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Q3U1D9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.36■□□□□ 0.69
Q3U1D9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Q3U1D9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3U1D9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3U1D9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3U1D9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Q3U1D9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3U1D9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3U1D9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3U1D9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q3U1D9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3U1D9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.34■□□□□ 0.69
Q3U1D9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Q3U1D9 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.34■□□□□ 0.69
Q3U1D9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q3U1D9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q3U1D9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q3U1D9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q3U1D9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q3U1D9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.33■□□□□ 0.69
Q3U1D9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Q3U1D9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q3U1D9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3U1D9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Q3U1D9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.32■□□□□ 0.68
Q3U1D9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3U1D9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.32■□□□□ 0.68
Q3U1D9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3U1D9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.32■□□□□ 0.68
Q3U1D9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q3U1D9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.32■□□□□ 0.68
Q3U1D9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q3U1D9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.31■□□□□ 0.68
Q3U1D9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.31■□□□□ 0.68
Q3U1D9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.31■□□□□ 0.68
Q3U1D9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.31■□□□□ 0.68
Q3U1D9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q3U1D9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Q3U1D9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Q3U1D9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Q3U1D9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3U1D9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q3U1D9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Q3U1D9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.29■□□□□ 0.68
Q3U1D9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Q3U1D9 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.29■□□□□ 0.68
Q3U1D9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3U1D9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Q3U1D9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3U1D9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3U1D9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q3U1D9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Q3U1D9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3U1D9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Q3U1D9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.28■□□□□ 0.68
Q3U1D9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Q3U1D9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Q3U1D9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Q3U1D9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q3U1D9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Q3U1D9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3U1D9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3U1D9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3U1D9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.27■□□□□ 0.68
Q3U1D9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q3U1D9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q3U1D9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q3U1D9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Q3U1D9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Q3U1D9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q3U1D9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Gm45444-201ENSMUST00000211394 898 ntBASIC19.25■□□□□ 0.67
Q3U1D9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q3U1D9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms