Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pkd1l3Q2EG98 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pkd1l3Q2EG98 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pkd1l3Q2EG98 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pkd1l3Q2EG98 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pkd1l3Q2EG98 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pkd1l3Q2EG98 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pkd1l3Q2EG98 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pkd1l3Q2EG98 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pkd1l3Q2EG98 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pkd1l3Q2EG98 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pkd1l3Q2EG98 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pkd1l3Q2EG98 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.08■□□□□ 0.81
Pkd1l3Q2EG98 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.08■□□□□ 0.81
Pkd1l3Q2EG98 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pkd1l3Q2EG98 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pkd1l3Q2EG98 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pkd1l3Q2EG98 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pkd1l3Q2EG98 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.8
Pkd1l3Q2EG98 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Pkd1l3Q2EG98 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pkd1l3Q2EG98 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pkd1l3Q2EG98 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.07■□□□□ 0.8
Pkd1l3Q2EG98 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pkd1l3Q2EG98 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pkd1l3Q2EG98 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pkd1l3Q2EG98 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Gm15546-201ENSMUST00000122095 826 ntBASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pkd1l3Q2EG98 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pkd1l3Q2EG98 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pkd1l3Q2EG98 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pkd1l3Q2EG98 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pkd1l3Q2EG98 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.04■□□□□ 0.8
Pkd1l3Q2EG98 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.04■□□□□ 0.8
Pkd1l3Q2EG98 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pkd1l3Q2EG98 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.03■□□□□ 0.8
Pkd1l3Q2EG98 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pkd1l3Q2EG98 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Pkd1l3Q2EG98 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pkd1l3Q2EG98 Gm43566-201ENSMUST00000196851 808 ntBASIC20.02■□□□□ 0.8
Pkd1l3Q2EG98 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.02■□□□□ 0.8
Pkd1l3Q2EG98 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pkd1l3Q2EG98 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pkd1l3Q2EG98 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pkd1l3Q2EG98 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.01■□□□□ 0.79
Pkd1l3Q2EG98 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pkd1l3Q2EG98 Gm13238-201ENSMUST00000117655 780 ntBASIC20.01■□□□□ 0.79
Pkd1l3Q2EG98 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pkd1l3Q2EG98 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pkd1l3Q2EG98 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pkd1l3Q2EG98 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pkd1l3Q2EG98 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pkd1l3Q2EG98 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pkd1l3Q2EG98 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.99■□□□□ 0.79
Pkd1l3Q2EG98 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pkd1l3Q2EG98 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.98■□□□□ 0.79
Pkd1l3Q2EG98 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pkd1l3Q2EG98 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.98■□□□□ 0.79
Pkd1l3Q2EG98 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.98■□□□□ 0.79
Pkd1l3Q2EG98 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pkd1l3Q2EG98 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pkd1l3Q2EG98 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.97■□□□□ 0.79
Pkd1l3Q2EG98 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pkd1l3Q2EG98 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pkd1l3Q2EG98 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pkd1l3Q2EG98 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pkd1l3Q2EG98 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pkd1l3Q2EG98 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pkd1l3Q2EG98 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pkd1l3Q2EG98 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.95■□□□□ 0.78
Pkd1l3Q2EG98 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.95■□□□□ 0.78
Pkd1l3Q2EG98 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pkd1l3Q2EG98 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pkd1l3Q2EG98 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pkd1l3Q2EG98 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pkd1l3Q2EG98 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.92■□□□□ 0.78
Pkd1l3Q2EG98 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 155.4 ms