Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a11P31650 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a11P31650 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.08■□□□□ 0.97
Slc6a11P31650 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.08■□□□□ 0.97
Slc6a11P31650 Gm37136-201ENSMUST00000194368 194 ntBASIC21.08■□□□□ 0.97
Slc6a11P31650 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a11P31650 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a11P31650 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a11P31650 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a11P31650 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.07■□□□□ 0.96
Slc6a11P31650 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a11P31650 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a11P31650 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Slc6a11P31650 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a11P31650 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a11P31650 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a11P31650 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a11P31650 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a11P31650 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Slc6a11P31650 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a11P31650 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a11P31650 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a11P31650 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.05■□□□□ 0.96
Slc6a11P31650 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a11P31650 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Slc6a11P31650 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a11P31650 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a11P31650 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a11P31650 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a11P31650 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a11P31650 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.04■□□□□ 0.96
Slc6a11P31650 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a11P31650 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Slc6a11P31650 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a11P31650 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a11P31650 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a11P31650 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a11P31650 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.03■□□□□ 0.96
Slc6a11P31650 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a11P31650 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a11P31650 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a11P31650 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a11P31650 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Slc6a11P31650 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Slc6a11P31650 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Slc6a11P31650 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Slc6a11P31650 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.01■□□□□ 0.95
Slc6a11P31650 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a11P31650 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a11P31650 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a11P31650 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a11P31650 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc6a11P31650 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a11P31650 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a11P31650 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a11P31650 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Slc6a11P31650 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a11P31650 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a11P31650 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a11P31650 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a11P31650 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a11P31650 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a11P31650 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a11P31650 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a11P31650 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a11P31650 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a11P31650 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a11P31650 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a11P31650 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Slc6a11P31650 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a11P31650 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Slc6a11P31650 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc6a11P31650 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc6a11P31650 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a11P31650 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a11P31650 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a11P31650 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a11P31650 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc6a11P31650 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Slc6a11P31650 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a11P31650 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Slc6a11P31650 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.93■□□□□ 0.94
Slc6a11P31650 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a11P31650 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a11P31650 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a11P31650 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a11P31650 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc6a11P31650 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.92■□□□□ 0.94
Slc6a11P31650 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Slc6a11P31650 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a11P31650 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a11P31650 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a11P31650 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a11P31650 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a11P31650 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a11P31650 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a11P31650 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a11P31650 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a11P31650 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a11P31650 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms