Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Polr2aP08775 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Polr2aP08775 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Polr2aP08775 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Polr2aP08775 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Polr2aP08775 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Polr2aP08775 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Polr2aP08775 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Polr2aP08775 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Polr2aP08775 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.39■■□□□ 1.82
Polr2aP08775 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Polr2aP08775 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Polr2aP08775 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.38■■□□□ 1.81
Polr2aP08775 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Polr2aP08775 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Polr2aP08775 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Polr2aP08775 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Polr2aP08775 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
Polr2aP08775 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2aP08775 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2aP08775 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Polr2aP08775 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Polr2aP08775 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.35■■□□□ 1.81
Polr2aP08775 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Polr2aP08775 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Polr2aP08775 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Polr2aP08775 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Polr2aP08775 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Polr2aP08775 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.34■■□□□ 1.81
Polr2aP08775 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Polr2aP08775 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.34■■□□□ 1.81
Polr2aP08775 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Polr2aP08775 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Polr2aP08775 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Polr2aP08775 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Polr2aP08775 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Polr2aP08775 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Polr2aP08775 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.33■■□□□ 1.81
Polr2aP08775 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC26.33■■□□□ 1.8
Polr2aP08775 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
Polr2aP08775 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
Polr2aP08775 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Polr2aP08775 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Polr2aP08775 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Polr2aP08775 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Polr2aP08775 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.31■■□□□ 1.8
Polr2aP08775 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Polr2aP08775 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
Polr2aP08775 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Polr2aP08775 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Polr2aP08775 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Polr2aP08775 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Polr2aP08775 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Polr2aP08775 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Polr2aP08775 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Polr2aP08775 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Polr2aP08775 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Polr2aP08775 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Polr2aP08775 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Polr2aP08775 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.29■■□□□ 1.8
Polr2aP08775 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Polr2aP08775 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.28■■□□□ 1.8
Polr2aP08775 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Polr2aP08775 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Polr2aP08775 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Polr2aP08775 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.27■■□□□ 1.8
Polr2aP08775 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Polr2aP08775 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.26■■□□□ 1.79
Polr2aP08775 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Polr2aP08775 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Polr2aP08775 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.25■■□□□ 1.79
Polr2aP08775 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Polr2aP08775 Amer2-203ENSMUST00000225247 2662 ntBASIC26.25■■□□□ 1.79
Polr2aP08775 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.24■■□□□ 1.79
Polr2aP08775 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Polr2aP08775 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Polr2aP08775 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Polr2aP08775 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Polr2aP08775 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.23■■□□□ 1.79
Polr2aP08775 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Polr2aP08775 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.22■■□□□ 1.79
Polr2aP08775 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.22■■□□□ 1.79
Polr2aP08775 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Polr2aP08775 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Polr2aP08775 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Polr2aP08775 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Polr2aP08775 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Polr2aP08775 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC26.21■■□□□ 1.79
Polr2aP08775 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Polr2aP08775 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Polr2aP08775 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Polr2aP08775 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC26.2■■□□□ 1.79
Polr2aP08775 Gm21956-201ENSMUST00000179946 522 ntBASIC26.2■■□□□ 1.79
Polr2aP08775 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Polr2aP08775 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Polr2aP08775 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Polr2aP08775 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Polr2aP08775 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Polr2aP08775 Etf1-202ENSMUST00000180351 108 ntBASIC26.18■■□□□ 1.78
Polr2aP08775 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms