Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC33■■■□□ 2.87
NefmP08553 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC33■■■□□ 2.87
NefmP08553 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
NefmP08553 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
NefmP08553 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.99■■■□□ 2.87
NefmP08553 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
NefmP08553 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
NefmP08553 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
NefmP08553 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
NefmP08553 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC32.97■■■□□ 2.87
NefmP08553 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
NefmP08553 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
NefmP08553 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
NefmP08553 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
NefmP08553 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
NefmP08553 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC32.96■■■□□ 2.87
NefmP08553 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
NefmP08553 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
NefmP08553 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
NefmP08553 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC32.95■■■□□ 2.86
NefmP08553 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
NefmP08553 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
NefmP08553 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
NefmP08553 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
NefmP08553 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
NefmP08553 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
NefmP08553 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
NefmP08553 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC32.92■■■□□ 2.86
NefmP08553 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NefmP08553 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC32.91■■■□□ 2.86
NefmP08553 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NefmP08553 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
NefmP08553 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
NefmP08553 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NefmP08553 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
NefmP08553 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.91■■■□□ 2.86
NefmP08553 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
NefmP08553 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
NefmP08553 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
NefmP08553 AC164433.2-201ENSMUST00000226346 1701 ntBASIC32.91■■■□□ 2.86
NefmP08553 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
NefmP08553 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
NefmP08553 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
NefmP08553 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
NefmP08553 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
NefmP08553 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
NefmP08553 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.89■■■□□ 2.86
NefmP08553 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
NefmP08553 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
NefmP08553 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC32.87■■■□□ 2.85
NefmP08553 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
NefmP08553 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
NefmP08553 Gm26766-202ENSMUST00000227544 2347 ntBASIC32.86■■■□□ 2.85
NefmP08553 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
NefmP08553 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
NefmP08553 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC32.85■■■□□ 2.85
NefmP08553 Dmtn-209ENSMUST00000228295 2572 ntBASIC32.84■■■□□ 2.85
NefmP08553 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
NefmP08553 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
NefmP08553 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
NefmP08553 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
NefmP08553 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
NefmP08553 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
NefmP08553 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
NefmP08553 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
NefmP08553 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
NefmP08553 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
NefmP08553 Gm28731-201ENSMUST00000185564 1569 ntBASIC32.8■■■□□ 2.84
NefmP08553 AC131739.1-201ENSMUST00000221692 1245 ntBASIC32.8■■■□□ 2.84
NefmP08553 Gm13889-201ENSMUST00000099689 1386 ntBASIC32.8■■■□□ 2.84
NefmP08553 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NefmP08553 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NefmP08553 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NefmP08553 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC32.79■■■□□ 2.84
NefmP08553 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
NefmP08553 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NefmP08553 Gm6821-201ENSMUST00000107540 542 ntBASIC32.79■■■□□ 2.84
NefmP08553 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC32.79■■■□□ 2.84
NefmP08553 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NefmP08553 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC32.79■■■□□ 2.84
NefmP08553 Gm13042-201ENSMUST00000119244 1955 ntBASIC32.79■■■□□ 2.84
NefmP08553 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NefmP08553 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NefmP08553 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
NefmP08553 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.78■■■□□ 2.84
NefmP08553 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC32.78■■■□□ 2.84
NefmP08553 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC32.77■■■□□ 2.84
NefmP08553 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC32.77■■■□□ 2.84
NefmP08553 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
NefmP08553 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC32.76■■■□□ 2.83
NefmP08553 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
NefmP08553 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
NefmP08553 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
NefmP08553 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
NefmP08553 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
NefmP08553 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
NefmP08553 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
NefmP08553 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
NefmP08553 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
NefmP08553 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms