Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01643 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01643 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
P01643 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
P01643 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01643 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01643 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
P01643 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01643 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
P01643 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
P01643 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01643 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.76■□□□□ 0.43
P01643 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.76■□□□□ 0.43
P01643 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01643 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01643 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
P01643 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01643 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.75■□□□□ 0.43
P01643 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01643 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.75■□□□□ 0.43
P01643 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01643 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01643 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01643 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01643 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01643 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01643 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01643 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
P01643 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.74■□□□□ 0.43
P01643 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.74■□□□□ 0.43
P01643 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01643 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.74■□□□□ 0.43
P01643 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
P01643 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
P01643 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01643 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01643 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.73■□□□□ 0.43
P01643 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.73■□□□□ 0.43
P01643 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01643 Gm5812-201ENSMUST00000061073 957 ntBASIC17.73■□□□□ 0.43
P01643 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.73■□□□□ 0.43
P01643 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01643 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01643 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
P01643 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
P01643 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P01643 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P01643 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P01643 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
P01643 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
P01643 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.71■□□□□ 0.43
P01643 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
P01643 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01643 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
P01643 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01643 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01643 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
P01643 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P01643 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.7■□□□□ 0.42
P01643 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01643 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.7■□□□□ 0.42
P01643 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01643 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
P01643 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
P01643 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
P01643 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.69■□□□□ 0.42
P01643 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01643 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
P01643 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.68■□□□□ 0.42
P01643 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P01643 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01643 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.68■□□□□ 0.42
P01643 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01643 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01643 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P01643 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P01643 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
P01643 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P01643 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.67■□□□□ 0.42
P01643 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.67■□□□□ 0.42
P01643 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01643 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01643 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P01643 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
P01643 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01643 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
P01643 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
P01643 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P01643 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
P01643 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01643 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.65■□□□□ 0.42
P01643 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01643 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms