Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Tom1O88746 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Tom1O88746 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Tom1O88746 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Tom1O88746 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Tom1O88746 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Tom1O88746 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
Tom1O88746 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Tom1O88746 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC30.85■■■□□ 2.53
Tom1O88746 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC30.85■■■□□ 2.53
Tom1O88746 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Tom1O88746 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Tom1O88746 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Tom1O88746 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Tom1O88746 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC30.82■■■□□ 2.53
Tom1O88746 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tom1O88746 Gm12821-201ENSMUST00000120022 600 ntBASIC30.82■■■□□ 2.52
Tom1O88746 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
Tom1O88746 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tom1O88746 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Tom1O88746 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.8■■■□□ 2.52
Tom1O88746 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Tom1O88746 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Tom1O88746 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Tom1O88746 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC30.79■■■□□ 2.52
Tom1O88746 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Tom1O88746 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Tom1O88746 Gm22238-201ENSMUST00000175222 88 ntBASIC30.78■■■□□ 2.52
Tom1O88746 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Tom1O88746 Gm8495-201ENSMUST00000188740 694 ntBASIC30.77■■■□□ 2.52
Tom1O88746 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Tom1O88746 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Tom1O88746 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tom1O88746 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Tom1O88746 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tom1O88746 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Tom1O88746 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Tom1O88746 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC30.75■■■□□ 2.51
Tom1O88746 AC140930.3-201ENSMUST00000222935 274 ntBASIC30.75■■■□□ 2.51
Tom1O88746 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tom1O88746 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Tom1O88746 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tom1O88746 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Tom1O88746 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
Tom1O88746 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.74■■■□□ 2.51
Tom1O88746 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Tom1O88746 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Tom1O88746 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC30.72■■■□□ 2.51
Tom1O88746 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Tom1O88746 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
Tom1O88746 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Tom1O88746 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC30.71■■■□□ 2.51
Tom1O88746 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Tom1O88746 Gm27454-201ENSMUST00000185090 204 ntBASIC30.7■■■□□ 2.51
Tom1O88746 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC30.7■■■□□ 2.5
Tom1O88746 Gm12922-201ENSMUST00000120626 809 ntBASIC30.69■■■□□ 2.5
Tom1O88746 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Tom1O88746 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Tom1O88746 Gm16464-201ENSMUST00000117815 1095 ntBASIC30.68■■■□□ 2.5
Tom1O88746 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Tom1O88746 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tom1O88746 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Tom1O88746 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Tom1O88746 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Tom1O88746 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC30.67■■■□□ 2.5
Tom1O88746 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC30.66■■■□□ 2.5
Tom1O88746 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Tom1O88746 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.65■■■□□ 2.5
Tom1O88746 Gm45417-201ENSMUST00000209533 758 ntBASIC30.65■■■□□ 2.5
Tom1O88746 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC30.65■■■□□ 2.5
Tom1O88746 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Tom1O88746 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Tom1O88746 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.64■■■□□ 2.5
Tom1O88746 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC30.64■■■□□ 2.5
Tom1O88746 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Tom1O88746 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.63■■■□□ 2.49
Tom1O88746 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.63■■■□□ 2.49
Tom1O88746 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.62■■■□□ 2.49
Tom1O88746 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Tom1O88746 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Tom1O88746 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Tom1O88746 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Tom1O88746 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
Tom1O88746 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC30.6■■■□□ 2.49
Tom1O88746 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Tom1O88746 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tom1O88746 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tom1O88746 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tom1O88746 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Tom1O88746 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC30.59■■■□□ 2.49
Tom1O88746 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Tom1O88746 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Tom1O88746 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Tom1O88746 Gm18284-201ENSMUST00000172604 624 ntBASIC30.57■■■□□ 2.48
Tom1O88746 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC30.57■■■□□ 2.48
Tom1O88746 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Tom1O88746 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Tom1O88746 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Tom1O88746 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Tom1O88746 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms