Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl13O55038 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl13O55038 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl13O55038 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl13O55038 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cxcl13O55038 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.02■□□□□ 0.63
Cxcl13O55038 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl13O55038 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Cxcl13O55038 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.01■□□□□ 0.63
Cxcl13O55038 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.01■□□□□ 0.63
Cxcl13O55038 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl13O55038 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl13O55038 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cxcl13O55038 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Cxcl13O55038 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cxcl13O55038 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.99■□□□□ 0.63
Cxcl13O55038 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl13O55038 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl13O55038 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cxcl13O55038 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl13O55038 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.98■□□□□ 0.63
Cxcl13O55038 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl13O55038 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl13O55038 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cxcl13O55038 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cxcl13O55038 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl13O55038 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.97■□□□□ 0.63
Cxcl13O55038 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl13O55038 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cxcl13O55038 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl13O55038 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cxcl13O55038 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl13O55038 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cxcl13O55038 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cxcl13O55038 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
Cxcl13O55038 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cxcl13O55038 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.96■□□□□ 0.63
Cxcl13O55038 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl13O55038 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl13O55038 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cxcl13O55038 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cxcl13O55038 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.95■□□□□ 0.62
Cxcl13O55038 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cxcl13O55038 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cxcl13O55038 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cxcl13O55038 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl13O55038 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl13O55038 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl13O55038 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl13O55038 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cxcl13O55038 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.94■□□□□ 0.62
Cxcl13O55038 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl13O55038 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl13O55038 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cxcl13O55038 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.93■□□□□ 0.62
Cxcl13O55038 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.93■□□□□ 0.62
Cxcl13O55038 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cxcl13O55038 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cxcl13O55038 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl13O55038 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl13O55038 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl13O55038 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.92■□□□□ 0.62
Cxcl13O55038 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cxcl13O55038 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.91■□□□□ 0.62
Cxcl13O55038 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl13O55038 Gm5812-201ENSMUST00000061073 957 ntBASIC18.91■□□□□ 0.62
Cxcl13O55038 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cxcl13O55038 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cxcl13O55038 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl13O55038 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl13O55038 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cxcl13O55038 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.9■□□□□ 0.62
Cxcl13O55038 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cxcl13O55038 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.9■□□□□ 0.62
Cxcl13O55038 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl13O55038 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cxcl13O55038 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl13O55038 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl13O55038 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cxcl13O55038 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cxcl13O55038 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cxcl13O55038 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.89■□□□□ 0.61
Cxcl13O55038 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cxcl13O55038 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Cxcl13O55038 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cxcl13O55038 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
Cxcl13O55038 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl13O55038 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl13O55038 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cxcl13O55038 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cxcl13O55038 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.87■□□□□ 0.61
Cxcl13O55038 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl13O55038 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl13O55038 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.87■□□□□ 0.61
Cxcl13O55038 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl13O55038 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cxcl13O55038 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl13O55038 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl13O55038 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcl13O55038 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms