Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC30.3■■■□□ 2.44
Cntnap1O54991 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cntnap1O54991 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cntnap1O54991 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cntnap1O54991 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Cntnap1O54991 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Cntnap1O54991 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Cntnap1O54991 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Cntnap1O54991 Flvcr1-202ENSMUST00000191946 1216 ntBASIC30.28■■■□□ 2.44
Cntnap1O54991 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
Cntnap1O54991 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Cntnap1O54991 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Cntnap1O54991 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC30.27■■■□□ 2.44
Cntnap1O54991 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Cntnap1O54991 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
Cntnap1O54991 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cntnap1O54991 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cntnap1O54991 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC30.26■■■□□ 2.43
Cntnap1O54991 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cntnap1O54991 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cntnap1O54991 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC30.24■■■□□ 2.43
Cntnap1O54991 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
Cntnap1O54991 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Cntnap1O54991 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC30.24■■■□□ 2.43
Cntnap1O54991 Gm22238-201ENSMUST00000175222 88 ntBASIC30.23■■■□□ 2.43
Cntnap1O54991 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cntnap1O54991 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Cntnap1O54991 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Cntnap1O54991 Gm27454-201ENSMUST00000185090 204 ntBASIC30.21■■■□□ 2.43
Cntnap1O54991 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cntnap1O54991 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
Cntnap1O54991 Gm8495-201ENSMUST00000188740 694 ntBASIC30.2■■■□□ 2.43
Cntnap1O54991 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cntnap1O54991 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cntnap1O54991 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cntnap1O54991 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Cntnap1O54991 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Cntnap1O54991 AC140930.3-201ENSMUST00000222935 274 ntBASIC30.18■■■□□ 2.42
Cntnap1O54991 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Cntnap1O54991 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Cntnap1O54991 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cntnap1O54991 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.17■■■□□ 2.42
Cntnap1O54991 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Cntnap1O54991 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Cntnap1O54991 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Cntnap1O54991 Gm12821-201ENSMUST00000120022 600 ntBASIC30.15■■■□□ 2.42
Cntnap1O54991 Gm45417-201ENSMUST00000209533 758 ntBASIC30.15■■■□□ 2.42
Cntnap1O54991 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC30.15■■■□□ 2.42
Cntnap1O54991 Gm29257-201ENSMUST00000186115 639 ntBASIC30.15■■■□□ 2.42
Cntnap1O54991 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cntnap1O54991 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Cntnap1O54991 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC30.14■■■□□ 2.41
Cntnap1O54991 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Cntnap1O54991 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC30.14■■■□□ 2.41
Cntnap1O54991 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Cntnap1O54991 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cntnap1O54991 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Cntnap1O54991 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.12■■■□□ 2.41
Cntnap1O54991 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.12■■■□□ 2.41
Cntnap1O54991 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC30.12■■■□□ 2.41
Cntnap1O54991 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Cntnap1O54991 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cntnap1O54991 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cntnap1O54991 Gm12922-201ENSMUST00000120626 809 ntBASIC30.11■■■□□ 2.41
Cntnap1O54991 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Cntnap1O54991 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Cntnap1O54991 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC30.11■■■□□ 2.41
Cntnap1O54991 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cntnap1O54991 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cntnap1O54991 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.1■■■□□ 2.41
Cntnap1O54991 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.09■■■□□ 2.41
Cntnap1O54991 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Cntnap1O54991 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Cntnap1O54991 Gm16464-201ENSMUST00000117815 1095 ntBASIC30.07■■■□□ 2.4
Cntnap1O54991 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Cntnap1O54991 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC30.06■■■□□ 2.4
Cntnap1O54991 Gm18284-201ENSMUST00000172604 624 ntBASIC30.06■■■□□ 2.4
Cntnap1O54991 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Cntnap1O54991 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC30.05■■■□□ 2.4
Cntnap1O54991 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.05■■■□□ 2.4
Cntnap1O54991 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
Cntnap1O54991 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Cntnap1O54991 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC30.05■■■□□ 2.4
Cntnap1O54991 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Cntnap1O54991 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Cntnap1O54991 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Cntnap1O54991 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Cntnap1O54991 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC30.03■■■□□ 2.4
Cntnap1O54991 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Cntnap1O54991 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cntnap1O54991 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC30.02■■■□□ 2.4
Cntnap1O54991 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cntnap1O54991 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
Cntnap1O54991 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cntnap1O54991 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.01■■■□□ 2.39
Cntnap1O54991 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Cntnap1O54991 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Cntnap1O54991 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cntnap1O54991 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Cntnap1O54991 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms