Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.91■□□□□ 0.62
Prrt1O35449 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prrt1O35449 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prrt1O35449 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prrt1O35449 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prrt1O35449 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.9■□□□□ 0.62
Prrt1O35449 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.9■□□□□ 0.62
Prrt1O35449 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prrt1O35449 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.9■□□□□ 0.62
Prrt1O35449 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prrt1O35449 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prrt1O35449 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prrt1O35449 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prrt1O35449 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.89■□□□□ 0.61
Prrt1O35449 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prrt1O35449 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prrt1O35449 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prrt1O35449 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prrt1O35449 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prrt1O35449 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Prrt1O35449 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.88■□□□□ 0.61
Prrt1O35449 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prrt1O35449 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Prrt1O35449 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Prrt1O35449 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prrt1O35449 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prrt1O35449 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Prrt1O35449 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Prrt1O35449 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prrt1O35449 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prrt1O35449 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prrt1O35449 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prrt1O35449 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.86■□□□□ 0.61
Prrt1O35449 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Prrt1O35449 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prrt1O35449 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.86■□□□□ 0.61
Prrt1O35449 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prrt1O35449 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Prrt1O35449 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prrt1O35449 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Prrt1O35449 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prrt1O35449 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prrt1O35449 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prrt1O35449 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prrt1O35449 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prrt1O35449 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
Prrt1O35449 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Prrt1O35449 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prrt1O35449 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Prrt1O35449 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prrt1O35449 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prrt1O35449 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Prrt1O35449 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Prrt1O35449 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prrt1O35449 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prrt1O35449 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Prrt1O35449 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prrt1O35449 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Prrt1O35449 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prrt1O35449 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prrt1O35449 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prrt1O35449 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prrt1O35449 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrt1O35449 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prrt1O35449 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prrt1O35449 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prrt1O35449 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prrt1O35449 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.79■□□□□ 0.6
Prrt1O35449 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prrt1O35449 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Prrt1O35449 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Prrt1O35449 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prrt1O35449 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
Prrt1O35449 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prrt1O35449 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prrt1O35449 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prrt1O35449 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prrt1O35449 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prrt1O35449 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prrt1O35449 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prrt1O35449 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prrt1O35449 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prrt1O35449 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prrt1O35449 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Prrt1O35449 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prrt1O35449 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prrt1O35449 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prrt1O35449 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prrt1O35449 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prrt1O35449 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prrt1O35449 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.74■□□□□ 0.59
Prrt1O35449 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms