Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3yl1O08641 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Sh3yl1O08641 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3yl1O08641 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3yl1O08641 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.13■□□□□ 0.97
Sh3yl1O08641 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3yl1O08641 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3yl1O08641 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Terc-201ENSMUST00000082862 423 ntBASIC21.11■□□□□ 0.97
Sh3yl1O08641 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3yl1O08641 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Sh3yl1O08641 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.1■□□□□ 0.97
Sh3yl1O08641 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3yl1O08641 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.1■□□□□ 0.97
Sh3yl1O08641 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3yl1O08641 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
Sh3yl1O08641 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3yl1O08641 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3yl1O08641 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sh3yl1O08641 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.09■□□□□ 0.97
Sh3yl1O08641 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Sh3yl1O08641 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3yl1O08641 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.08■□□□□ 0.97
Sh3yl1O08641 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3yl1O08641 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3yl1O08641 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3yl1O08641 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3yl1O08641 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3yl1O08641 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3yl1O08641 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3yl1O08641 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3yl1O08641 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.08■□□□□ 0.96
Sh3yl1O08641 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3yl1O08641 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3yl1O08641 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3yl1O08641 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3yl1O08641 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3yl1O08641 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3yl1O08641 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3yl1O08641 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sh3yl1O08641 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3yl1O08641 Cap2-205ENSMUST00000225824 1634 ntBASIC21.05■□□□□ 0.96
Sh3yl1O08641 Gm27502-201ENSMUST00000183495 199 ntBASIC21.05■□□□□ 0.96
Sh3yl1O08641 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sh3yl1O08641 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3yl1O08641 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3yl1O08641 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3yl1O08641 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.04■□□□□ 0.96
Sh3yl1O08641 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.04■□□□□ 0.96
Sh3yl1O08641 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3yl1O08641 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3yl1O08641 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3yl1O08641 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3yl1O08641 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.03■□□□□ 0.96
Sh3yl1O08641 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3yl1O08641 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3yl1O08641 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3yl1O08641 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3yl1O08641 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sh3yl1O08641 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3yl1O08641 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3yl1O08641 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3yl1O08641 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3yl1O08641 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3yl1O08641 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sh3yl1O08641 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Sh3yl1O08641 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sh3yl1O08641 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3yl1O08641 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3yl1O08641 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3yl1O08641 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3yl1O08641 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.98■□□□□ 0.95
Sh3yl1O08641 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Sh3yl1O08641 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms