Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav19A0A0B4J1K4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav19A0A0B4J1K4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav19A0A0B4J1K4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav19A0A0B4J1K4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.63■□□□□ 0.25
Trav19A0A0B4J1K4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav19A0A0B4J1K4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.63■□□□□ 0.25
Trav19A0A0B4J1K4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav19A0A0B4J1K4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav19A0A0B4J1K4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav19A0A0B4J1K4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav19A0A0B4J1K4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav19A0A0B4J1K4 Gm37136-201ENSMUST00000194368 194 ntBASIC16.6■□□□□ 0.25
Trav19A0A0B4J1K4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav19A0A0B4J1K4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav19A0A0B4J1K4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav19A0A0B4J1K4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav19A0A0B4J1K4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav19A0A0B4J1K4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav19A0A0B4J1K4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav19A0A0B4J1K4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav19A0A0B4J1K4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav19A0A0B4J1K4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav19A0A0B4J1K4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav19A0A0B4J1K4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav19A0A0B4J1K4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav19A0A0B4J1K4 Nkain2-201ENSMUST00000092602 558 ntBASIC16.58■□□□□ 0.24
Trav19A0A0B4J1K4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav19A0A0B4J1K4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav19A0A0B4J1K4 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.57■□□□□ 0.24
Trav19A0A0B4J1K4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav19A0A0B4J1K4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav19A0A0B4J1K4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav19A0A0B4J1K4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav19A0A0B4J1K4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav19A0A0B4J1K4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav19A0A0B4J1K4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav19A0A0B4J1K4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav19A0A0B4J1K4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav19A0A0B4J1K4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav19A0A0B4J1K4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav19A0A0B4J1K4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav19A0A0B4J1K4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav19A0A0B4J1K4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav19A0A0B4J1K4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav19A0A0B4J1K4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav19A0A0B4J1K4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav19A0A0B4J1K4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trav19A0A0B4J1K4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav19A0A0B4J1K4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav19A0A0B4J1K4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
Trav19A0A0B4J1K4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav19A0A0B4J1K4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.53■□□□□ 0.24
Trav19A0A0B4J1K4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav19A0A0B4J1K4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav19A0A0B4J1K4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav19A0A0B4J1K4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav19A0A0B4J1K4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trav19A0A0B4J1K4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav19A0A0B4J1K4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav19A0A0B4J1K4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav19A0A0B4J1K4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav19A0A0B4J1K4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav19A0A0B4J1K4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav19A0A0B4J1K4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav19A0A0B4J1K4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav19A0A0B4J1K4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms