Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav11A0A0B4J1J9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav11A0A0B4J1J9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15.29■□□□□ 0.04
Trav11A0A0B4J1J9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav11A0A0B4J1J9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav11A0A0B4J1J9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav11A0A0B4J1J9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav11A0A0B4J1J9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav11A0A0B4J1J9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav11A0A0B4J1J9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav11A0A0B4J1J9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav11A0A0B4J1J9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav11A0A0B4J1J9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav11A0A0B4J1J9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav11A0A0B4J1J9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav11A0A0B4J1J9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav11A0A0B4J1J9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav11A0A0B4J1J9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav11A0A0B4J1J9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav11A0A0B4J1J9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav11A0A0B4J1J9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav11A0A0B4J1J9 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.26■□□□□ 0.03
Trav11A0A0B4J1J9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav11A0A0B4J1J9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav11A0A0B4J1J9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav11A0A0B4J1J9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav11A0A0B4J1J9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav11A0A0B4J1J9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav11A0A0B4J1J9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav11A0A0B4J1J9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav11A0A0B4J1J9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav11A0A0B4J1J9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav11A0A0B4J1J9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav11A0A0B4J1J9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav11A0A0B4J1J9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav11A0A0B4J1J9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav11A0A0B4J1J9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Trav11A0A0B4J1J9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav11A0A0B4J1J9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav11A0A0B4J1J9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav11A0A0B4J1J9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav11A0A0B4J1J9 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.23■□□□□ 0.03
Trav11A0A0B4J1J9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav11A0A0B4J1J9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav11A0A0B4J1J9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav11A0A0B4J1J9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav11A0A0B4J1J9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav11A0A0B4J1J9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav11A0A0B4J1J9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav11A0A0B4J1J9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav11A0A0B4J1J9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav11A0A0B4J1J9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav11A0A0B4J1J9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav11A0A0B4J1J9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trav11A0A0B4J1J9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav11A0A0B4J1J9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav11A0A0B4J1J9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav11A0A0B4J1J9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav11A0A0B4J1J9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav11A0A0B4J1J9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav11A0A0B4J1J9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav11A0A0B4J1J9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav11A0A0B4J1J9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav11A0A0B4J1J9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav11A0A0B4J1J9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav11A0A0B4J1J9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav11A0A0B4J1J9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav11A0A0B4J1J9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav11A0A0B4J1J9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav11A0A0B4J1J9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav11A0A0B4J1J9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav11A0A0B4J1J9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav11A0A0B4J1J9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav11A0A0B4J1J9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav11A0A0B4J1J9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 249 ms