Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm3550W4VSN7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.65□□□□□ -0.39
Gm3550W4VSN7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm37153-201ENSMUST00000193637 231 ntBASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gm3550W4VSN7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Gm7230-201ENSMUST00000173026 815 ntBASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.63□□□□□ -0.39
Gm3550W4VSN7 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.63□□□□□ -0.39
Gm3550W4VSN7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm3550W4VSN7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Gm7862-201ENSMUST00000121461 292 ntBASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Gm5682-201ENSMUST00000173402 505 ntBASIC12.62□□□□□ -0.39
Gm3550W4VSN7 Gm10499-201ENSMUST00000174094 934 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms